Advancing Scientific Progress through Genomic Data Sharing and Access

Workshop Agenda

January 24, 2011 Topic
8:30 a.m. - 9:30 a.m. Registration
9:30 a.m. - 9:45 a.m. Introductions and Welcoming Remarks
Stephen Chanock, M.D.
Elizabeth Gillanders, Ph.D.
Margaret Tucker, M.D.
National Cancer Institute
9:45 a.m. - 10:50 a.m. Research on Cancer Outcomes

Moderator:
Patricia Hartge, Sc.D., National Cancer Institute

Speakers:
Testing new methods and larger hypotheses with data from dbGaP
Nancy Cox, Ph.D.
The University of Chicago

Genome-wide association study meta-analysis for colorectal cancer risk
Carolyn Hutter, Ph.D.
Fred Hutchinson Cancer Research Center

Critical roles of CGEMS data in PCa genomic translational studies
Jianfeng Xu, M.D., Dr.P.H
Wake Forest University School of Medicine

10:50 a.m. - 11:55 a.m. Research on Non-Cancer Outcomes

Moderator:
Neil E. Caporaso, M.D., National Cancer Institute

Speakers:
Using multiple control sets for genome-wide associations studies of cancer and autoimmune diseases
Christopher Amos, Ph.D.
The University of Texas M.D. Anderson Cancer Center

Working with dbGaP data in GWAS meta-analysis and CNV detection settings - the CHOP experience
Struan Grant, Ph.D.
The Children’s Hospital of Philadelphia

Shared controls in genetic studies of rheumatoid arthritis risk
Robert Martin Plenge, M.D., Ph.D.
Harvard Medical School
Brigham and Women’s Hospital

11:55 a.m. - 12:05 p.m. Break
12:05 p.m. - 1:10 p.m. Methods Development

Moderator:
Nilanjan Chatterjee, Ph.D., National Cancer Institute

Speakers:
Using dbGaP data to understand susceptibility of breast cancer: two examples of enrichment analysis
Dezheng Huo, M.D., M.S., Ph.D.
The University of Chicago

Methods for association testing of local haplotypes and of distant interacting loci in large datasets
Itsik Pe’er, Ph.D, M.S.
Columbia University

1:10 p.m. - 2:10 p.m. Lunch (on your own)
2:10 p.m. - 2:25 p.m. Methods Development

Moderator:
Nilanjan Chatterjee, Ph.D., National Cancer Institute

Speakers:
Using dbGaP data to understand susceptibility of breast cancer: two examples of enrichment analysis
Dezheng Huo, M.D., M.S., Ph.D.
The University of Chicago

Methods for association testing of local haplotypes and of distant interacting loci in large datasets
Itsik Pe’er, Ph.D, M.S.
Columbia University

2:25 p.m. - 5:00 p.m. Forum for Feedback on NIH Data Sharing Policy

Moderator:
Stephen Chanock, M.D., National Cancer Institute

Speakers:
Sharing genomic data: The NIH GWAS experience and next steps
Laura Lyman Rodriguez, Ph.D.
National Human Genome Research Institute

Citable data plans and standards
Myles Axton, Ph.D.
Nature Genetics

Respondent:
Nancy Cox, Ph.D.
The University of Chicago

Forum for Feedback on dbGaP

Moderator:
Elizabeth Gillanders, Ph.D., National Cancer Institute

Speakers:
dbGaP authorized access system: current features and development plans for 2011
Michael Feolo, M.S.
Steve Sherry, Ph.D.
National Center for Biotechnology Information

Experience with dbGaP data submission and access:
International Genetic Epidemiology Society (IGES)

Catherine M. Stein, Ph.D.
Case Western Reserve University

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